Search results for "Density-functional tight-binding"
showing 4 items of 4 documents
Computational modelling of boron nitride nanostructures based on density-functional tight-binding
2014
Boorinitridin (BN) nanorakenteet ovat sekä rakenteellisesti että lujuusominaisuuksiensa puolesta hyvin samankaltaisia vastaavien hiilirakenteiden kanssa. Suurimpana erona on BN:n sähköinen eristävyys kun taas hiilirakenteet ovat johteita tai puolijohteita. BN onkin hyvin lupaava nanomateriaali ja sille on odotettavissa sovelluksia muun muassa muiden nanorakenteiden suojaajana ja komposiittimateriaalien nanokudosaineena. BN:n nanorakenteiden ominaisuuksia tutkitaan laskennallisesti yleensä joko tiheysfunktionaaliteorialla (DFT) tai tiukan sidoksen (TB) malleilla. Ensin mainittu on tarkka mutta laskennallisesti vaativa, kun taas jälkimmäinen on laskennallisesti kevyt mutta epätarkka. Tässä ty…
Computational studies of torsional properties of single-walled carbon nanotubes
2010
Current thesis presents computational studies of the torsional twist in single walled carbon nanotubes (SWCNTs). Since SWCNTs can be viewed as rolled up graphene sheets, our aim is to explain their torsion constants via shear mod- ulus of graphene in pristine, and single- and double vacancy cases. In addition, fundamental energy gap response to torsion is investigated. Calculations of defected structures is computationally expensive as it requires larger simula- tion cell with large number of atoms. To reduce the cost of computations we take the advantage of chiral symmetry of nanotubes instead of translational one, and faster performance of density-functional tight-binding method compared …
New QM/MM implementation of the DFTB3 method in the gromacs package.
2015
The approximate density-functional tight-binding theory method DFTB3 has been implemented in the quantum mechanics/molecular mechanics (QM/MM) framework of the Gromacs molecular simulation package. We show that the efficient smooth particle–mesh Ewald implementation of Gromacs extends to the calculation of QM/MM electrostatic interactions. Further, we make use of the various free-energy functionalities provided by Gromacs and the PLUMED plugin. We exploit the versatility and performance of the current framework in three typical applications of QM/MM methods to solve biophysical problems: (i) ultrafast proton transfer in malonaldehyde, (ii) conformation of the alanine dipeptide, and (iii) el…